Standardized Database Alleles
- Joshua Lamos-Sweeney
Owned by Joshua Lamos-Sweeney
Target release | 2.3 |
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Epic | |
Document status | DRAFT |
Document owner | @Joshua Lamos-Sweeney |
Designer | @Joshua Lamos-Sweeney |
Tech lead | @Joshua Lamos-Sweeney |
Technical writers |
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QA |
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Objective
Standardize to upper-case all string typed allele types in the database, for ease of computation.
Success metrics
Goal | Metric |
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Standardize downstream use |
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Assumptions
Requirements
Requirement | User Story | Importance | Jira Issue | Notes | |
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| 1 | Must deal with Reference and Alternate values | GDM-773 | HIGH |
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| 2 | Must deal with all string-for-allele dataset types | GDM-772 |
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User interaction and design
Open Questions
Question | Answer | Date Answered |
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If we have an IUPAC storage type, ‘uppercasing’ may be actively wrong. | We don’t have such a type currently. |
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Out of Scope
Standardizing Marker Group allele cases.