2022-03-08 Meeting notes
- Evan Rees
Date
Mar 8, 2022
Participants
@Evan Rees
@Sebastian Raubach
@Francisco Agosto
@guilhem.sempere
@Dave Matthews
@Moira Sheehan
Goals
Updates from collaborators
BreedBase update
PostgreSQL / Tripal update
Forward planning
Discussion topics
Item | Presenter | Notes |
|---|---|---|
GDM update | @Dave Matthews | Difficulties extracting across Maize datasets Loading from VCF extremely slow - may be fixed when new version is deployed Issues with multiallelic dataset - PLINK import |
Gigwa update | @guilhem.sempere | Completed! Will back up scripts, other files in workspace |
Germinate update | @Sebastian Raubach | Benchmarks completed Need to move/rename files |
MontyDB | @Francisco Agosto | Will communicate with @Joel Byrnes regarding VM deployment |
Phase 2 collaborators | @Evan Rees @Mathieu Rouard | BreedBase - waiting on designated representative. Tripal - waiting on reply from authors |
Writing / Publication |
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Target journals - |
| GigaScience BMCBioinformatics |