GOBii EiB Webinars Home
EiB and GOBii joined force in 2019 to provide a series of free monthly webinars. The webinars are conducted on Mondays. Sessions start at 10-11 AM US Eastern Time.
Details about each session can be found below to access to the past webinar recordings and preview the upcoming webinar.
All sessions are broadcasted on https://cornell.zoom.us/my/gobiiwebinar and recorded for playback on GOBii YouTube channel. All sessions are free and open to everyone.
Interested parties can subscribe yourselves on http://gobiiproject.org/ by filling in “Subscriptions” form.
Year | Month | Date | Host | Topic 1 | Speaker 1 | Topic 2 | Speaker 2 |
2016 | Nov | 14 | Kate | MABC (0:00-26:03 in Recording) | Mike Olsen | Ontology (26:04-46:43 in Recording) | Rosemary |
Dec | 12 | Carlos | B4R Demo CANCELLED | Argem Flores | NA | NA | |
2017 | Jan | 9 | HTPG | Eng Hwa NG <N.Enghwa@cgiar.org> | INTERTEK data output PDF | Petra van Roggen <petra.vanroggen@intertek.com> | |
Feb | 13 | Star | QTL mapping using RADseq genotyping (30 mins) Slides can be found: https://drive.google.com/file/d/0B_23cU_PwG6WOVk4ZkNhWEo1c00/view Play recording (2:00-33:00 in recording) | Carlos Ignacio | Genomic Selection in Maize Breeding at CIMMYT Slides can be found: Presentation Play recording (33:00-78:00 in recording) | Xuecai Zhang | |
Mar | 13 | Cinta | Panzea curation, GOBII TASSEL (60 min)
| Buckler Group | Panzea curation, GOBII TASSEL (60 min) | Buckler Group | |
Apr | 10 |
| Gene Expression Atlas | Hima | |||
May | 8 | Star | Cornell Genotyping and LIMS https://www.dropbox.com/s/m5uyzccensnjmcn/GOBII%20Seminar%2005092017%20by%20Dr.%20Qi%20Sun.mp4?dl=0 (60 min) | Qi Sun | Same | Qi Sun | |
June | 12 | Star | Prediction and Breeding Design by Simulation Tools (60 min) PDF | WANG Jiankang <wangjiankang@caas.cn> | Same | ||
July | 10 | Star | Updates on using BrAPI as a data source | Reinhard Simon | Same | ||
Aug | 7 |
| Will present at GOBII annual meeting | Maul | |||
Sept | 11 |
| CANCELLED | ||||
Oct | 9 |
| CENCELLED | ||||
Nov | 13 | Star | Maize genotyping pipeline | Robert Bukowski <bukowski@cornell.edu> | Robert Bukowski <bukowski@cornell.edu> | ||
Dec | 11 | Star | Bottom-up Approach to Increasing Plant Breeding Efficiency in Africa 171211_Bottom-up Approach to Increaseing Plant Breeding Efficiency in Africa-MRagot.oxps | Michel Ragot <michelragot@nfgene.com> |
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2018 | Jan | 8 | Star | Application of GOBII and Molecular Breeding in IRRI's Irrigated Breeding Pipeline (60 min) | Joshua Nathaniel Cobb <j.cobb@irri.org> |
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Feb | 12 | Star | Achievements of large scale deployment of rAmSeq sequencing technology in maize genomic selection and 2018 implementation plan (60 min) | OLSEN, Michael Scott (CIMMYT-Kenya) <M.Olsen@cgiar.org>, Xuecai Zhang, Manje Gowda, Yoseph Beyenne, and team |
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Mar | 12 | Kate | Help! My data are a out of control! Novel services for management of distributed data March GOBii monthly seminar recording PDF | Ramona L. Walls <rwalls@cyverse.org> |
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Apr | 9 | Kate | Information management Support Tools for Breeding (Case: Potato) | Salas, Elisa (CIP) <E.SALAS@CGIAR.ORG>, Molano Jazmin, Arias Raul and RIU Team |
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May | 14 | Kate | Improving the Predictability of Breeding Programs through an enabling Enterprise Breeding System | HAGEN, Thomas John (CIMMYT) <T.HAGEN@cgiar.org> |
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June | 11 | Star | An Overview of Practical Haplotype Graph (PHG) YouTube link: https://youtu.be/0NpRGcAxCPs PDF Slides: https://drive.google.com/file/d/1CMTn4kk626Noh8PWULM_7rf22UvuLCis/view?usp=sharing | Ramu Punna <rp444@cornell.edu> |
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July | 9 | Susanne | CIMMYT wheat program's experience in implementation of Genomic Selection: status and prospects YouTube link: https://youtu.be/V1khVBOCjak PDF Slides: PDF | ROSYARA, Umesh (CIMMYT) U.ROSYARA@cgiar.org, JULIANA, Philomin (CIMMYT) <P.JULIANA@cgiar.org>; CROSSA HIRIART, José Luis Francisco (CIMMYT) <J.CROSSA@CGIAR.ORG>; DREISIGACKER, Susanne (CIMMYT) <S.Dreisigacker@cgiar.org> |
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Aug | 13 |
| Cancelled due to conflict with GOBii annual meeting |
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Sept | 10 |
| G.E.M.STM: Enabling Agricultural Innovation and the International Agroinformatics Alliance YouTube link: https://youtu.be/5xzLZkAIv5g PDF slides: https://drive.google.com/file/d/12pXY0K83R2GB_GNOfTxjblkb8WKIKdpb/view | Kevin Silverstein <kats@umn.edu> |
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Oct | 15 |
| Genotypic Data and Sample Quality Control: Workflow Development and Implementation in Wheat YouTube link: https://youtu.be/98bOmnV6lkM PDF slides: | ROSYARA, Umesh (CIMMYT) <U.ROSYARA@cgiar.org> |
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Nov | 26 |
| Informatics Visualization Software You Tube Link: Slides: http://bioinf.hutton.ac.uk/flapjack/gobii-november.pptx
| Iain Milne <Iain.Milne@hutton.ac.uk> |
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Dec | 10 |
| Excellence in Breeding Platform-CENCELLED | QUINN, Michael Gavin (CIMMYT) <M.QUINN@cgiar.org> |
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2019 | Jan | 28 | Umesh | Genomic assisted hybrid wheat breeding PDF: Genomic assisted hybrid wheat breeding progress and prospects at CIMMYT.pdf YouTube: About 50 restorer male lines (T. timopheevii R-lines) developed by CIMMYT hybrid wheat program are available for interested users. To request the seed please contact b.r.basnet@cgiar.org or CIMMYT germplasm bank |
Dr. Bhoja Basnet (B.R.Basnet@cgiar.org) and team |
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Feb | 25 | Sam Storr | Excellence in Breeding Toolbox http://excellenceinbreeding.org/toolbox | Sam Storr from CIMMYT S.STORR@cgiar.org | |||
March | 25 | John Carlos Ignacio | Mate and Check: A Practical Approach to Identifying F1 Hybrids
| John Carlos Ignacio (IRRI) <j.ignacio@irri.org> | |||
April | 22 | Pancho/Philomin | Multi-trait Multi-environment Deep learning Genomic-enabled Prediction in Plant Breeding | CROSSA HIRIART, José Luis Francisco (CIMMYT) <J.CROSSA@CGIAR.ORG> JULIANA, Philomin (CIMMYT) <P.JULIANA@cgiar.org> | |||
May | 20 | Moira/Star | BreeDBase: a digital ecosystem for plant breeding | Guillaume Jean Bauchet <gjb99@cornell.edu> Lukas A. Mueller <lam87@cornell.edu> | |||
June | 10 | M5-CoP | Learning by doing: From Soil Science to Data Science YouTube: Here are some of the links asked at the webinar and David provided as below: Here is the link to the housing and cropland map that David Guerena's team produced for Nepal. Here is the link to the hand-held spectrometer. | David Guerena (CIMMYT) | |||
July | 22 | M5-CoP | EiB Sabbatical Automated UI Testing Framework and B4R QC Process | Jahzeel Ramos (IRRI) and Dolores Dolores Pagtananan (IRRI) | |||
August | 26 | Buckler Group | Breaking the curse of dimensionality to identify causal variants in Breeding 4.0 Youtube: https://youtu.be/4XUIkeigdDs | Guillaume Ramstein <gr226@cornell.edu> | |||
September | 16 | Hima | Integrated multi-omics data identifies a thermo-sensitive male sterile line for two-line hybrid system in pigeonpea | Pazhamala, Lekha (L.Pazhamala@cgiar.org) | |||
October | 21 | M5-CoP | BMS new features and progress towards an API driven development
PDF: PDF | CRIMI, Mariano Omar (IBP) <M.CRIMI@cgiar.org> and Jan Erik Backlund (J.BACKLUND@cgiar.org) | |||
November | 18 | M5-CoP | An EiB progress report on CGIAR Breeding Program Modernization Process Youtube: https://youtu.be/O-7bNH0ZIZs | George Kotch - EiB Module 1 | |||
December | 16 | M5-CoP | Galaxy for Genomics-enabled Breeding slides: bit.ly/gxy-eib-2019 YouTube recording: https://youtu.be/dwN8qLAZ4f0 | Dave Clements and Mo Heydarian, Galaxy Project, Johns Hopkins University and Star Yanxin Gao, GOBii Project, Cornell University | |||
2020 | Jan | 2020 Webinars | |||||
February | |||||||
March | 9 | BrAPI Update Slides: BrAPI_GOBii_Webinar_Mar_9_2020.pdf YouTube recording: https://youtu.be/ksobDR9Uohc
| Pete Selby, BrAPI Coordinator | ||||
April | 27 | EiB – Module IV: Breeding Operations and Phenotyping Update | Gustavo Teixeira, EiB | ||||
May | 25 | CGIAR Excellence in Breeding Platform (EiB) | Ana Oliveira, Rajaguru Bohar, Manilal William, Eng Hwa Ng, and Mike Olsen | ||||
June | 22 | EiB Module 5: 2019 Sabbatical Seminars - Session 1 Speaker 1: BrAPI Fieldmap: A BrAPI compliant tool for editing field spatial layout using GeoJson information Speaker 2: Genomic prediction in Andean Common bean | Speaker 1: Nahuel Soldevilla, Integrated Breeding Platform/Leafnode
Speaker 2: Santiago Diaz, Alliance Bioversity-CIAT | ||||
July | 13 | Marker Data Curation via Metadata Filtering: An introduction to a genotypic data curation tool developed through the GOBii project | Andrew Kowalczyk, DArT | ||||
August | 24 | The GOBii project: genomics data management and new BrAPI-enabled tools for marker-assisted breeding in Flapjack | Liz Jones, GOBii and Excellence in Breeding (EiB) | ||||
September | 28 | Breeding Insight: Creating breeder-centric software and integrated data management solutions | Moira Sheehan, Director of Breeding Insight | ||||
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2020 Webinars