Dependencies and their Licenses

	Project	Dependency	Dependency Type	License	Link
GOBII-API-MODEL	FasterXML/Jackson	Jackson databind	maven	The Apache Software License, Version 2.0	http://www.apache.org/licenses/LICENSE-2.0
		Jackson mapper-asl	maven
	Apache Commons	commons-lang	maven	The Apache Software License, Version 2.0	http://www.apache.org/licenses/LICENSE-2.0
		commons-io	maven
	Simple XML Serialization	simple-xml	maven	The Apache Software License, Version 2.0	http://www.apache.org/licenses/LICENSE-2.0
	JavaMail API	mail	maven	Common Development and Distribution License (CDDL) v1.0	https://glassfish.dev.java.net/public/CDDLv1.0.html
		javax.mail	maven	CDDL/GPLv2+CE	https://glassfish.java.net/public/CDDL+GPL_1_1.html
	SLF4J	slf4j-api	maven	MIT license	http://www.slf4j.org/license.html
		slf4j-log4j12	maven
		jcl-over-slf4j	maven
	Logback	logback-classic	maven	dual-licensed under the EPL v1.0 and the LGPL 2.1	http://logback.qos.ch/license.html
		logback-core	maven
	SpringFramework	spring-context	maven	The Apache Software License, Version 2.0	http://www.apache.org/licenses/LICENSE-2.0.txt
	Google/Gson	Gson	maven	The Apache Software License, Version 2.0	http://www.apache.org/licenses/LICENSE-2.0.txt


GOBII-CLIENT
	FasterXML/Jackson	Jackson mapper asl	maven	The Apache Software License, Version 2.0	http://www.apache.org/licenses/LICENSE-2.0
		Jackson databind	maven
	Google/Gson	Gson	maven	The Apache Software License, Version 2.0	http://www.apache.org/licenses/LICENSE-2.0.txt
	JUnit	JUnit	maven	Eclipse Public License 1.0	http://www.eclipse.org/legal/epl-v10.html
	Apache HTTP Components	httpclient	maven	Apache License	http://www.apache.org/licenses/LICENSE-2.0
		httpcore	maven
		httpclient-cache	maven
		httpmime	maven
		fluent-hc	maven
	SLF4J	slf4j-api	maven	MIT license	http://www.slf4j.org/license.html
		slf4j-log4j12	maven
		jcl-over-slf4j	maven
	Logback	logback-classic	maven	dual-licensed under the EPL v1.0 and the LGPL 2.1	http://logback.qos.ch/license.html
		logback-core
			maven

GOBII-DAO
	SpringFramework	spring-context	maven	The Apache Software License, Version 2.0	http://www.apache.org/licenses/LICENSE-2.0.txt
		spring-tx	maven
	Hibernate	hibernate-jpa-2.1-api	maven	Eclipse Public License (EPL), Version 1.0Eclipse Distribution License (EDL), Version 1.0	http://www.eclipse.org/legal/epl-v10.html http://www.eclipse.org/org/documents/edl-v10.php
		hibernate-entitymanager	maven	GNU Lesser General Public License	http://www.gnu.org/licenses/lgpl-2.1.html
	Postgresql	postgresql	maven	BSD License	http://jdbc.postgresql.org/license.html
	JUnit	junit	maven	Eclipse Public License 1.0	http://www.eclipse.org/legal/epl-v10.html
	SLF4J	slf4j-api	maven	MIT license	http://www.slf4j.org/license.html
		slf4j-log4j12	maven
		jcl-over-slf4j	maven
	Logback	logback-classic	maven	dual-licensed under the EPL v1.0 and the LGPL 2.1	http://logback.qos.ch/license.html
		logback-core	maven


GOBII-DOMAIN
	SpringFramework	spring-context	maven	The Apache Software License, Version 2.0	http://www.apache.org/licenses/LICENSE-2.0.txt
		spring-security-core	maven


GOBII-DTOMAPPING
	SLF4J	slf4j-api	maven	MIT license	http://www.slf4j.org/license.html
		slf4j-log4j12	maven
		jcl-over-slf4j	maven
	Logback	logback-core	maven	dual-licensed under the EPL v1.0 and the LGPL 2.1	http://logback.qos.ch/license.html
		logback-classic	maven


GOBII-MODEL
	FasterXML/Jackson	jackson-databind	maven	The Apache Software License, Version 2.0	http://www.apache.org/licenses/LICENSE-2.0.txt
		jackson-mapper-asl	maven
	Apache Commons	commons-lang	maven	The Apache Software License, Version 2.0	http://www.apache.org/licenses/LICENSE-2.0
		commons-io
	Simple XML Serialization	simple-xml	maven	The Apache Software License, Version 2.0	http://www.apache.org/licenses/LICENSE-2.0
	JavaMail API	javax.mail	maven	CDDL/GPLv2+CE	https://glassfish.java.net/public/CDDL+GPL_1_1.html
		mail		Common Development and Distribution License (CDDL) v1.0	https://glassfish.dev.java.net/public/CDDLv1.0.html
	SLF4J	slf4j-api	maven	MIT license	http://www.slf4j.org/license.html
		slf4j-log4j12	maven
		jcl-over-slf4j	maven
	SpringFramework	spring-context	maven	The Apache Software License, Version 2.0	http://www.apache.org/licenses/LICENSE-2.0.txt
	Logback	logback-classic	maven	dual-licensed under the EPL v1.0 and the LGPL 2.1	http://logback.qos.ch/license.html
		logback-core	maven
	Google/Gson	Gson	maven	The Apache Software License, Version 2.0	http://www.apache.org/licenses/LICENSE-2.0.txt


GOBII-PROCESS
	SpringFramework	spring-context	maven	The Apache Software License, Version 2.0	http://www.apache.org/licenses/LICENSE-2.0.txt
		spring-tx	maven
		spring-security-core	maven
	BCFTools	bcftools executable	External Command	GNU GPL v3 OR MIT EXPAT	https://github.com/samtools/bcftools/blob/develop/LICENSE
	VCFTools	vcftools executable	External Command	GNU LGPL v3	http://vcftools.sourceforge.net/license.html
	Plink	plink executable	External Command	GNU GPL v2
	Perl JSON::XS	Perl Module	Perl Module	Artistic License and GPL	http://search.cpan.org/~rurban/Cpanel-JSON-XS-3.0107/XS.pm#LICENSE
	Perl TXT::CSV	Perl Module	Perl Module	'Free Software'	http://search.cpan.org/~makamaka/Text-CSV-1.21/lib/Text/CSV.pm#COPYRIGHT_AND_LICENSE
	Perl File::Temp	Perl Module	Perl Module	'Free Software'	http://perldoc.perl.org/File/Temp.html#COPYRIGHT-AND-LICENSE
	Python pandas	Python Module	Python Module	3-clause BSD	http://pandas.pydata.org/pandas-docs/stable/overview.html#license

GOBII-WEB
	SpringFramework	spring-web	maven	The Apache Software License, Version 2.0	http://www.apache.org/licenses/LICENSE-2.0.txt
		spring-webmvc	maven
		spring-context	maven
		spring-orm	maven
		spring-security-core	maven
		spring-security-web	maven
		spring-security-config	maven
		spring-security-taglibs	maven
		spring-security-crypto	maven
		spring-tx	maven
		spring-test	maven
	JBoss	jboss-logging	maven	Apache License, version 2.0	http://www.apache.org/licenses/LICENSE-2.0.txt
	SLF4J	slf4j-api	maven	MIT license	http://www.slf4j.org/license.html
		slf4j-log4j12	maven
		jcl-over-slf4j	maven
	Logback	logback-classic	maven	dual-licensed under the EPL v1.0 and the LGPL 2.1	http://logback.qos.ch/license.html
		logback-core	maven
	Hibernate	hibernate-jpa-2.1-api	maven	Eclipse Public License (EPL), Version 1.0Eclipse Distribution License (EDL), Version 1.0	http://www.eclipse.org/legal/epl-v10.html http://www.eclipse.org/org/documents/edl-v10.php
		hibernate-entitymanager	maven	GNU Lesser General Public License	http://www.gnu.org/licenses/lgpl-2.1.html
	JUnit	JUnit	maven	Eclipse Public License 1.0	http://www.eclipse.org/legal/epl-v10.html
	Apache HTTP Components	httpclient	maven	Apache License	http://www.apache.org/licenses/LICENSE-2.0
		httpcore	maven
		httpclient-cache	maven
		httpmime	maven
		fluent-hc	maven
	Apache Commons	commons-dbcp	maven	The Apache Software License, Version 2.0	http://www.apache.org/licenses/LICENSE-2.0
	Apache Tomcat	tomcat-servlet-api	maven	The Apache Software License, Version 2.0	http://www.apache.org/licenses/LICENSE-2.0
	Liquibase	liquibase-core	maven	GNU Lesser General Public License	http://www.gnu.org/licenses/lgpl.html
	FasterXML/Jackson	jackson-databind	maven	The Apache Software License, Version 2.0	http://www.apache.org/licenses/LICENSE-2.0.txt
		jackson-mapper-asl
	Opencsv	opencsv	maven		http://www.apache.org/licenses/LICENSE-2.0.txt
	Postgresql	postgresql	maven	BSD License	http://jdbc.postgresql.org/license.html
GOBII PG DW	Postgresql	postgresql	Data Warehouse	PostgreSQL License, a liberal Open Source license	https://www.postgresql.org/about/licence/
	Psycopg2	psycopg2	IFL python command	LGPL	http://initd.org/psycopg/license/
Data Warehouse
	MonetDB DW	MonetDB	Data Warehouse	Mozilla Public License v 2.0	https://www.monetdb.org/AboutUs/MonetDBLicense_MPL2.0
		MonetDB Python API	Python commands	Mozilla Public License, v. 2.0	https://github.com/gijzelaerr/pymonetdb#license
	HDF5		Data Warehouse	“Redistribution and use in source and binary forms, with or without modification, are permitted for any purpose (including commercial purposes)"	https://support.hdfgroup.org/HDF5/doc/Copyright.html
Deployment
		Vagrant		The MIT License	https://github.com/mitchellh/vagrant/blob/master/LICENSE
		Ansible		GNU General Public License	https://github.com/ansible/ansible/blob/devel/COPYING

Dependencies and their Licenses

Project

Dependency

License

Link

GOBII-API-MODEL

Jackson databind

The Apache Software License, Version 2.0

Jackson mapper-asl

commons-lang

The Apache Software License, Version 2.0

commons-io

simple-xml

The Apache Software License, Version 2.0

mail

Common Development and Distribution License (CDDL) v1.0

javax.mail

CDDL/GPLv2+CE

slf4j-api

MIT license

slf4j-log4j12

jcl-over-slf4j

logback-classic

dual-licensed under the EPL v1.0 and the LGPL 2.1

logback-core

spring-context

The Apache Software License, Version 2.0

Gson

The Apache Software License, Version 2.0

GOBII-CLIENT

Jackson mapper asl

The Apache Software License, Version 2.0

Jackson databind

Gson

The Apache Software License, Version 2.0

JUnit

Eclipse Public License 1.0

httpclient

Apache License

httpcore

httpclient-cache

httpmime

fluent-hc

slf4j-api

MIT license

slf4j-log4j12

jcl-over-slf4j

logback-classic

dual-licensed under the EPL v1.0 and the LGPL 2.1

logback-core

GOBII-DAO

spring-context

The Apache Software License, Version 2.0

spring-tx

hibernate-jpa-2.1-api

Eclipse Public License (EPL), Version 1.0Eclipse Distribution License (EDL), Version 1.0

hibernate-entitymanager

GNU Lesser General Public License

postgresql

BSD License

junit

Eclipse Public License 1.0

slf4j-api

MIT license

slf4j-log4j12

jcl-over-slf4j

logback-classic

dual-licensed under the EPL v1.0 and the LGPL 2.1

logback-core

GOBII-DOMAIN

spring-context

The Apache Software License, Version 2.0

spring-security-core

GOBII-DTOMAPPING

slf4j-api

MIT license

slf4j-log4j12

jcl-over-slf4j

logback-core

dual-licensed under the EPL v1.0 and the LGPL 2.1