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  • Load:
    • create the entities needed
      • for samples, need to create
        • PI
        • project
        • experiment
        • platform
        • protocol
        • vendor
        • vendor-protocol
      • for markers, need to create
        • platform
        • mapset
        • marker group(s), if needed in subsequent extract
      • for datasets, need to create analyses
        • calling, and any other(s)
    • files to be provided for any load scenario
      • input file
      • json file
  • Extract
    • appropriate loads need to happen first 
    • files to be provided for extract scenario(s)
    • for Extract by Sample -
      • list of entities in .txt file format (germplasm names, external codes, or dnasample names)
    • for Extract by Marker - 
      • list of marker names in .txt file format, or
      • name of marker group
        • marker group will need to be created first
  • type of test - positive or negative
    • and whether comparisons are needed at the end
  • specify location
    • input files
    • output files if comparison needs to be done
  • No emails will be sent
  • view results to see which tests have passed and which tests have failed
    • for failed tests, need
      • access to logs
      • access to all artifacts
  • if a comparison is needed
    • Status: Failed/ Passed

      • Success Report

        • # of records

        • # of columns

        • Execution time

    • Failed Report:

      • Status: Failed/Passed

        • for each failure:

          • failure type

          • Record #

          • column #

    • Failure Types:

      • Data Validation failure

      • Genotype mismatch

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