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Definitions

Reference - The authoritative genome reference and associated linked files for a physical mapset.

Field Descriptions

  • Reference Name: Mandatory name of a reference and must be unique.
  • Version: Mandatory version number for the reference.
  • Link: Optional external web link to source of reference.
  • File Path: Optional file name, including fully qualified path to reference genome file.

Add a New Reference

  1. Select Define | References from the menu bar. A list of existing references display on the left-hand side of the form. Export exports a text file of the references listed.
  2. Enter the reference name in the Reference Name field. The reference name must be unique.
  3. Enter a version number(required: e.g. v1, v2) associated with the reference genome. 
  4. Optional to link to an external website, and a local file path into the applicable fields.
  5. Click Add New.  A confirmation message displays with successful request, and the name of the new reference displays on the left-hand side of the form.


Update an Existing Reference

  1. Select Define | References from the menu bar. A list of existing references display on the left-hand side of the form.
  2. Select the reference you want to edit from the left-hand side of the page.
  3. Edit any applicable fields.
  4. Click Update.  A confirmation message displays with successful update.  
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