...
System | Group/Institution | Contact |
|---|---|---|
Germinate | JHI | Sebastian |
MontyDB | Cornell | Francisco |
GDM | Cornell | Joel |
Breedbase | BTI | Ask Tetima |
Gigwa | CIRAD | Guilhem |
PHG | Cornell | Ask Ed |
BCF | Broad Institute | |
GDR-BIMS (https://github.com/laceysanderson ) | Un. of Washington | Dori? |
Patrick |
VM allocations
VM Hostname | Status | Server Pool | Assignment | ||||||
|---|---|---|---|---|---|---|---|---|---|
| cbsugobii09 | Germinate | |||||||
| cbsugobii09 | GDM | |||||||
| cbsugobii10 | Gigwa | |||||||
| cbsugobii10 | MontyDB | |||||||
| cbsugobii11 | Breedbase | |||||||
| cbsugobii11 | PHG |
...
Dataset | Format | Location |
|---|---|---|
Maize NAM | CSV | /shared_data/test_data/NAM_HM32/csv |
Simulated datasets | ||
polyploid data in VCF | ||
indel data | ||
rice high density array | ||
African rice |
Actions:
- presentations on polyploid data
- user accounts for participants
- identify benchmarking criteria