...
- Load:
- create the entities needed
- for samples, need to create
- PI
- project
- experiment
- platform
- protocol
- vendor
- vendor-protocol
- for markers, need to create
- platform
- mapset
- marker group(s), if needed in subsequent extract
- for datasets, need to create analyses
- calling, and any other(s)
- for samples, need to create
- files to be provided for any load scenario
- input file
- json file
- Loads must go through Data Validation
- create the entities needed
- Extract
- appropriate loads need to happen first
- files to be provided for extract scenario(s)
- for Extract by Sample -
- list of entities in .txt file format (germplasm names, external codes, or dnasample names)
- for Extract by Marker -
- list of marker names in .txt file format, or
- name of marker group
- marker group will need to be created first
- type of test - positive or negative
- and whether comparisons are needed at the end
- specify location
- host needs to be dynamic
- crop needs to be dynamic
- input files
- output files if comparison needs to be done
- No emails will be sent
- view results to see which tests have passed and which tests have failed
- for failed tests, need
- access to logs
- access to all artifacts
- for failed tests, need
- if a comparison is needed
Status: Failed/ Passed
Success Report
# of records
# of columns
Execution time
Failed Report:
Status: Failed/Passed
for each failure:
failure type
Record #
column #
Failure Types:
Data Validation failure
Genotype mismatch
- Once a test has completed
- All entities created by the test need to be removed from the DB
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