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#RequirementUser StoryImportanceJira IssueNotes
1Extract to sample.file - props and IDs
Jira Legacy
showSummaryfalse
serverSystem JIRA
serverId3ed8d091-172c-31ee-8b1a-f688a0e72656
keyGDM-441

As a GDM user, I want to be able to extract additional fields including various props and IDs.

For sample.file

  • Props (both system and user defined)
    • germplasm props
    • dnasample props
    • project props
  • IDs:
    • germplasm_id
    • dnasample_id
    • dnarun_id
  • Headers for props fields in sample.file should be prefixed with the main entity table name. e.g. trial_name in dnasample props should have a header "dnasample_trial_name" in sample.file
Status
colourRed
titleHIGH


2Extract to marker.file - props and IDs
Jira Legacy
showSummaryfalse
serverSystem JIRA
serverId3ed8d091-172c-31ee-8b1a-f688a0e72656
keyGDM-442

As a GDM user, I want to be able to extract additional fields including various props and IDs.
For marker.file:

  • marker props (both system and user defined)
  • IDs:
    • marker_id
    • linkage_group_id
  • Headers for props fields in marker.file should be prefixed with the main entity table name. e.g. probe1 in dnasample props should have a header "marker_probe1" in marker.file



3Extract props to Dataset.hmp.txt
Jira Legacy
showSummaryfalse
serverSystem JIRA
serverId3ed8d091-172c-31ee-8b1a-f688a0e72656
keyGDM-443

As a GDM user, I want to be able to extract additional props fields and see them in Dataset.hmp.txt

  • Dataset.hmp.txt will contain all the props fields, both system and user defined
  • Dataset.hmp.txt will not contain any DB IDs



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