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Users will like to be able to extract meta information they have loaded to GDM, both system defined and custom ones.
The following properties are up for discussion on whether they should be extracted or not:
- Project props
Mapset props
Platform props
In addition, there is a need for IDs to be extracted for various entities.
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- For sample.file
- Props (both system and user defined)
- germplasm props
- dnasample props
- project props
- IDs:
- germplasm_id
- dnasample_id
- dnarun_id
- Props (both system and user defined)
- For marker.file:
- marker props (both system and user defined)
- IDs:
- marker_id
- linkage_group_id
- Headers for props fields in the files should be prefixed with the main entity table name. e.g. trial_name in dnasample props should have a header "dnasample_trial_name" in sample.file
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Question | Answer | Date Answered |
---|---|---|
Should the following properties be extracted:
| yes to project props | |
What samples fields should be included in Hapmap file? |
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